{"id":57,"date":"2008-03-15T16:03:26","date_gmt":"2008-03-16T00:03:26","guid":{"rendered":"http:\/\/www.spreadingscience.com\/2008\/03\/15\/open-presenting\/"},"modified":"2008-04-03T14:58:20","modified_gmt":"2008-04-03T22:58:20","slug":"open-presenting","status":"publish","type":"post","link":"https:\/\/www.spreadingscience.com\/2008\/03\/15\/open-presenting\/","title":{"rendered":"Open Presenting"},"content":{"rendered":"

\"python\"by <\/em><\/span>belgianchocolate<\/a><\/em><\/strong><\/span><\/p>\n

<\/a><\/em><\/strong><\/span>
\nPublishing On OpenWetWare – Lessons Learned 4 – Presenting:Python<\/a>
\n[Via Programmable Cells<\/a>]<\/p>\n

This is the fifth report of the \u2018Publishing on OpenWetWare\u2019 series. In brief, I am writing an article on OWW from start to finish: initial writing -> collecting comments -> publishing on arXiv.org -> presenting at a conference. For other articles, see one<\/a>, two<\/a>, three<\/a>, four<\/a>. In this report, I\u2019ll share my experiences in presenting the work at Pycon 2008<\/a>.<\/p><\/blockquote>\n

This is the most recent part in a continuing series by Julius Lucks<\/a> about publishing on <\/em>OpenWetWare<\/a><\/em>, an example of Open Science. Initially, OpenWetWare was a great site to find <\/em>protocols<\/a><\/em> of all sorts. It has been expanding very rapidly to incorporate many facets of Science 2.0. This is one such. It led to a presentation dealing with his work and you can read the ‘paper’ dealing with his topic: <\/em>Python All A Scientist Needs<\/a><\/em>. Python is the programming language used here and it presents many advantages useful for scientists. It includes a special package, <\/em>BioPython<\/a><\/em>, just for biologists, which is supported by the <\/em>Open Bioinformatics Foundation<\/a><\/em>. So, we see an entire network of Open Source organizations that produce tools that not only make their work easier but also the work of others. By embracing these tools, one can engage the entire network and help use all the knowledge contained in it to help solve problems.<\/em><\/p>\n

<\/p>\n

Technorati Tags: Bioinformatics<\/a>, Science<\/a>, Social media<\/a><\/p>\n

<\/p>\n","protected":false},"excerpt":{"rendered":"

by belgianchocolate Publishing On OpenWetWare – Lessons Learned 4 – Presenting:Python [Via Programmable Cells] This is the fifth report of the \u2018Publishing on OpenWetWare\u2019 series. In brief, I am writing an article on OWW from start to finish: initial writing -> collecting comments -> publishing on arXiv.org -> presenting at a conference. For other articles, … Continue reading Open Presenting<\/span> →<\/span><\/a><\/p>\n","protected":false},"author":5,"featured_media":0,"comment_status":"open","ping_status":"open","sticky":false,"template":"","format":"standard","meta":{"spay_email":"","footnotes":"","jetpack_publicize_message":"","jetpack_is_tweetstorm":false},"categories":[7,3,4],"tags":[],"class_list":["post-57","post","type-post","status-publish","format-standard","hentry","category-open-access","category-science","category-web-20"],"jetpack_featured_media_url":"","jetpack_publicize_connections":[],"jetpack_sharing_enabled":true,"jetpack_shortlink":"https:\/\/wp.me\/pe2yp-V","jetpack_likes_enabled":true,"jetpack-related-posts":[{"id":319,"url":"https:\/\/www.spreadingscience.com\/2008\/08\/11\/multi-level-experience\/","url_meta":{"origin":57,"position":0},"title":"Multi-level experience","date":"August 11, 2008","format":false,"excerpt":"by laffy4k Cameron Neylon and the full web2.0 experience: [Via OpenWetWare] Earlier today fellow OWW blogger Cameron Neylon gave a talk at the Institutional Web Managers Workshop in Aberdeen and did so, not only for those present at the venue, but also to anyone with internet access. Cameron set out\u2026","rel":"","context":"In "Science"","img":{"alt_text":"","src":"https:\/\/i2.wp.com\/www.spreadingscience.com\/wp-content\/uploads\/2008\/08\/122-405446783-a88c63ce0c.jpg?resize=350%2C200","width":350,"height":200},"classes":[]},{"id":254,"url":"https:\/\/www.spreadingscience.com\/2008\/06\/27\/life-scientists-at-friendfeed\/","url_meta":{"origin":57,"position":1},"title":"Life scientists at Friendfeed","date":"June 27, 2008","format":false,"excerpt":"Life Sciences likes this: Friendfeed: [Via OpenWetWare] I'm going to assume that only those currently using FriendFeed will understand the self reference in the title but if you didn't that's OK. Just keep on reading, you'll get it, eventually. If you happen to be interested or work in the life\u2026","rel":"","context":"In "Knowledge Creation"","img":{"alt_text":"","src":"","width":0,"height":0},"classes":[]},{"id":410,"url":"https:\/\/www.spreadingscience.com\/2008\/10\/16\/a-new-approach-to-publishing\/","url_meta":{"origin":57,"position":2},"title":"A new approach to publishing","date":"October 16, 2008","format":false,"excerpt":"by Marcin Wichary An experiment in open access publishing: [Via Bench Marks] The new edition of Essentials of Glycobiology, \" the largest, most authoritative volume available on the structure, synthesis, and biology of glycans (sugar chains), molecules that coat cell surfaces and proteins and play important roles in many normal\u2026","rel":"","context":"In "Open Access"","img":{"alt_text":"","src":"https:\/\/i0.wp.com\/www.spreadingscience.com\/wp-content\/uploads\/2008\/10\/type.jpg?resize=350%2C200","width":350,"height":200},"classes":[]},{"id":337,"url":"https:\/\/www.spreadingscience.com\/2008\/08\/21\/royalties\/","url_meta":{"origin":57,"position":3},"title":"Royalties","date":"August 21, 2008","format":false,"excerpt":"by Vik Nanda Royalties for journal article authors: [Via Bench Marks] I\u2019m happy to say that this week we sent out our first round of royalty payments to authors of original articles in CSH Protocols. Because we\u2019re doing some reprinting of material from our already-published laboratory manuals, we built in\u2026","rel":"","context":"In "Science"","img":{"alt_text":"","src":"https:\/\/i2.wp.com\/www.spreadingscience.com\/wp-content\/uploads\/2008\/08\/ribosome.jpg?resize=350%2C200","width":350,"height":200},"classes":[]},{"id":110,"url":"https:\/\/www.spreadingscience.com\/2008\/04\/11\/science-in-the-open\/","url_meta":{"origin":57,"position":4},"title":"Science in the open","date":"April 11, 2008","format":false,"excerpt":"by jeffpearce Progress toward Public Access to Science: [Via PLoS Biology: New Articles] PLoS Chairman of the Board Harold Varmus applauds the newly enacted NIH public access policy as a positive step toward ensuring greater access to and better use of the scientific literature. This very nicely discusses some of\u2026","rel":"","context":"In "General"","img":{"alt_text":"","src":"","width":0,"height":0},"classes":[]},{"id":317,"url":"https:\/\/www.spreadingscience.com\/2008\/08\/08\/open-access-textbooks\/","url_meta":{"origin":57,"position":5},"title":"Open Access Textbooks","date":"August 8, 2008","format":false,"excerpt":"by SoftPIX_Techie Interview with Flat World Knowledge: [Via Open Access News] Dian Schaffhauser, Textbook Publishing in a Flat World, Campus Technology, August 6, 2008. (Thanks to Garrett Eastman.) An interview with Eric Frank, co-founder of OA textbook publisher Flat World Knowledge. See also our past posts on FWK.The idea of\u2026","rel":"","context":"In "Open Access"","img":{"alt_text":"","src":"https:\/\/i2.wp.com\/www.spreadingscience.com\/wp-content\/uploads\/2008\/08\/flateart.jpg?resize=350%2C200","width":350,"height":200},"classes":[]}],"_links":{"self":[{"href":"https:\/\/www.spreadingscience.com\/wp-json\/wp\/v2\/posts\/57"}],"collection":[{"href":"https:\/\/www.spreadingscience.com\/wp-json\/wp\/v2\/posts"}],"about":[{"href":"https:\/\/www.spreadingscience.com\/wp-json\/wp\/v2\/types\/post"}],"author":[{"embeddable":true,"href":"https:\/\/www.spreadingscience.com\/wp-json\/wp\/v2\/users\/5"}],"replies":[{"embeddable":true,"href":"https:\/\/www.spreadingscience.com\/wp-json\/wp\/v2\/comments?post=57"}],"version-history":[{"count":0,"href":"https:\/\/www.spreadingscience.com\/wp-json\/wp\/v2\/posts\/57\/revisions"}],"wp:attachment":[{"href":"https:\/\/www.spreadingscience.com\/wp-json\/wp\/v2\/media?parent=57"}],"wp:term":[{"taxonomy":"category","embeddable":true,"href":"https:\/\/www.spreadingscience.com\/wp-json\/wp\/v2\/categories?post=57"},{"taxonomy":"post_tag","embeddable":true,"href":"https:\/\/www.spreadingscience.com\/wp-json\/wp\/v2\/tags?post=57"}],"curies":[{"name":"wp","href":"https:\/\/api.w.org\/{rel}","templated":true}]}}